Publications


INSTITUTIONYEARSTITLEJOURNAL
Theragen Etex2018Microbial acclimatization to lipidic–waste facilitates the efficacy of acidogenic fermentationChemical Engineering Journal
Theragen Etex2018Data on transcriptome profiling of circulating microRNAs in dairy cattleData in Brief
Theragen Etex2018Simultaneous detection of barrier‐ and immune‐related gene variations in patients with atopic dermatitis by reverse blot hybridization assayClinical and Experimental Dermatology
Theragen Etex2018Metabolic influence of walnut phenolic extract on mitochondria in a colon cancer stem cell modelEuropean Journal of Nutrition
Theragen Etex2018Identification of Epithelial-Mesenchymal Transition-related Target Genes Induced by the Mutation of Smad3 Linker PhosphorylationJournal of Cancer Prevention
Theragen Etex2018Repurposing the Cord Blood Bank for Haplobanking of HLA‐Homozygous iPSCs and Their Usefulness to Multiple PopulationsStem Cells
Theragen Etex2018Genome-wide transcriptomic analysis of BR-deficient Micro-Tom reveals correlations between drought stress tolerance and brassinosteroid signaling in tomatoPlant Physiology and Biochemistry
Theragen Etex2018Successful application of human-based methyl capture sequencing for methylome analysis in non-human primate modelsBMC Genomics
Theragen Etex2018Genomic Analyses Revealed Radiation-induced Glioblastoma in a Subset of Recurrent Medulloblastoma (IF: 12.21)Acta Neuropathologica
Theragen Etex2018Genome-wide identification of InDel markers from imported Rice varietiesAgronomy
Theragen Etex2018Identification of transposable elements fused in the exonic region of the olive flounder genomeGenes and Genomics
Theragen Etex2018Combined Mutation of Apc, Kras, and Tgfbr2 Effectively Drives Metastasis of Intestinal CancerCancer Research
Theragen Etex2018First Investigation of Microbial Community Composition in a Bridge (Gadeok Channel) between Jinhae-Masan Bay and South Sea, KoreaOcean Science Journal
Theragen Etex2018Profiling and identification of pregnancy-associated microRNAs to detect early pregnancy in dairy cattleGenes and Genomics
Theragen Etex2018Temperature-dependent immune response of olive flounder (Paralichthys olivaceus) infected with viral hemorrhagic septicemia virus (VHSV)Genes and Genomics
Theragen Etex2018Transcriptome analysis of olive flounder (Paralichthys olivaceus) head kidney infected with moderate and high virulent strains of infectious viral hemorrhagic septicaemia virus (VHSV)Fish and Shellfish Immunilogy
Theragen Etex2018Interactions among the variants of insulin-related genes and nutrients increase the risk of type 2 diabetesNutrition Research
Theragen Etex2018An efficient and tunable parameter to improve variant calling for whole genome and exome sequencing dataGenes and Genomics
Theragen Etex2017Isoform Sequencing Provides a More Comprehensive View of the Panax ginseng TranscriptomeGenes
Theragen Etex2017Long-read transcriptome data for improved gene prediction in Lentinula edodesData in Brief
Theragen Etex2017Development of Genome-Wide SSR Markers from Angelica gigas Nakai Using Next Generation SequencingGenes
Theragen Etex2017Recapitulation of Genome-wide Association Study on Chronic Periodontitis in a Korean PopulationBiomedical Science Letters
Theragen Etex2017Total serum bilirubin and 8-year incident type 2 diabetes mellitus: The Korean Genome and Epidemiology StudyDiabetes & Metabolism
Theragen Etex2017Association of PD-L1 expression with tumor-infiltrating immune cells and mutation burden in the high-grade neuroendocrine carcinoma of the lungJournal of Thoracic Oncology
Theragen Etex2017Simultaneous detection of barrier- and immune-related gene variations in patients with atopic dermatitis by reverse blot hybridization assayClinical and Experimental Dermatology
Theragen Etex2017Comprehensive Transcriptome Profiling of Balding and Non-Balding Scalps in Trichorhinophalangeal Syndrome Type I PatientAnnals of dermatology
Theragen Etex2017Identification of novel candidate variants including COL6A6 polymorphisms in early-onset atopic dermatitis using whole-exome sequencingBMC medical Genomics
Theragen Etex2017accD nuclear transfer of Platycodon grandiflorum and the plastid of early CampanulaceaeBMC Genomics
Theragen Etex2017Pathway profiles based on gene-set enrichment analysis in the honey bee Apis mellifera under brood rearing-suppressed conditionsGenomics
Theragen Etex2017Integrated analysis of leaf morphological and color traits in different populations of Chinese cabbage (Brassica rapa ssp. pekinensis)Theoretical and Applied Genetics
Theragen Etex2017Functional Characterization of the β-amyrin Synthase Gene Involved in Platycoside Biosynthesis from in Platycodon grandiflorumHorticulture, Environment, and Biotechnology
Theragen Etex2017The Whole-Genome and Transcriptome of the Manila Clam (Ruditapes philippinarum)Genome Biology and Evolution
Theragen Etex2017Development of 44 Novel Polymorphic SSR Markers for Determination of Shiitake Mushroom (Lentinula edodes) CultivarsGenes
Theragen Etex2017Use of whole-exome sequencing to determine the genetic basis of signs of skin youthfulness in Korean womenJournal of the European Academy of Dermatology and Venereology
Theragen Etex2017Barcode System for Genetic Identification of Soybean [Glycine max (L.) Merrill] Cultivars Using InDel Markers Specific to Dense Variation BlocksFrontiers in Plant Science
Theragen Etex2017RNA seq- and DEG-based comparison of developmental toxicity in fish embryos of two species exposed to Iranian heavy crude oilComparative Biochemistry and Physiology - Part C: Toxicology & Pharmacology
Theragen Etex2016Dysregulation JAK2 expression by TrkC promotes metastasis potential, and EMT program of metastatic breast cancerScientific Reports
Theragen Etex2016Transcriptome Profiling and In Silico Analysis of the Antimicrobial Peptides of the Grasshopper Oxya chinensis sinuosaJournal of Microbiology and Biotechnology
Theragen Etex2016Stage-Wise Identification and Analysis of miRNA from Root-Knot Nematode Meloidogyne incognitaInternational Journal of Molecular Sciences
Theragen Etex2016Efficient generation of transgenic cattle using the DNA transposon and their analysis by next-generation sequencingScientific Reports
Theragen Etex2016Aberrantly expressed microRNAs in the context of bladder tumorigenesisInvestigative and Clinical Urology
Theragen Etex2016Single nucleotide polymorphisms in exomes of high- and low-marbled meats in Korean cattleAnimal Genetics
Theragen Etex2016Whole‑genome de novo sequencing, combined with RNA‑Seq analysis, reveals unique genome and physiological features of the amylolytic yeast Saccharomycopsis fibuligera and its interspecies hybridBiotechnology for Biofuels
Theragen Etex2016Whole genome de novo seqeuncing and genome annotation of the world popular cultivated edible mushroom, lentinula eddoesJournal of Biotechnology
Theragen Etex2016Whole Genome Re-Sequencing of Three Domesticated Chicken BreedsBio One
Theragen Etex2016Trans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylationNature Gentics
Theragen Etex2015Obesity Alters the Microbial Community Profile in Korean AdolescentsPLoS One
Theragen Etex2015Gene structure variation in segmental duplication block C of human chromosome 7q 11.23 during primate evolutionGene
Theragen Etex2015Identification of genomic mutations associated with clinical outcomes of induction chemotherapy in patients with head and neck squamous cell carcinomaJournal of Cancer Research and Clinical Oncology
Theragen Etex2015HEpD: A database describing epigenetic differences between Thoroughbred and Jeju horsesGene
Theragen Etex2015Genome-Wide Analysis of DNA Methylation beforeand after Exercise in the Thoroughbred Horse with MeDIP-Seq (IF: 13.958)Molecules and Cells
Theragen Etex2015Trans-ancestry genome-wide association study identifies 12 genetic loci influencing blood pressure and implicates a role for DNA methylation (IF: 27.959)Nature Genetics
Theragen Etex2015SLC15A2 genomic variation is associated with the extraordinary response of sorafenib treatment: whole-genome analysis in patients with hepatocellular carcinomaOncotarget
Theragen Etex2015Identification of a possible susceptibility locus for UVB-induced skin tanning phenotype in Korean females using genomewide association studyExperimental Dermatology
Theragen Etex2015Genomewide association study on chronic periodontitis in Korean population: results from the Yangpyeong health cohort.Journal of Clinical Periodontology
Theragen Etex2015Whole genome sequencing of an ethnic Pathan (Pakhtun) from the north-west of PakistanBMC Genomics
Theragen Etex2015Ancient Ethiopian genome reveals extensive Eurasian admixture in Eastern Africa (IF: 37.205)Science
Theragen Etex2015Global Profiling of Various Metabolites in Platycodon grandiflorum by UPLC-QTOF/MSInternational Journal of Molecular Sciences
Theragen Etex2015Identification of a possible susceptibility locus for UVB-induced skin tanning phenotype in Korean females using genome-wide association studyExperimental Dermatology
Theragen Etex2014Genome-Wide Identification and Classification of MicroRNAs Derived from Repetitive ElementsGenomics & Informatics
Theragen Etex2014Identification and Characterization of MicroRNAs in Normal Equine Tissues by Next Generation SequencingPLOS ONE
Theragen Etex2014Whole-Genome Analyses of Korean Native and Holstein Cattle Breeds by Massively Parallel SequencingPLOS ONE
Theragen Etex2014Comparison of targeted next generation sequencing with conventional sequencing for predicting responsiveness to epidermal groqth factor receptor-tyrosine kinase inhibitor(EGFR-TJI) therapy in never-smokers with lung adenocarcinomaLung Cancer
Theragen Etex2014New lung cancer panel for high-throughput targeted resequencingGenomics & Informatics
Theragen Etex2014The feasibility study of non-invasive fetal trisomy 18 and 21 detection with semiconductor sequencing platformPLoS ONE
Theragen Etex/Genome Research Foundation2014Whole-genome analysis of a patient with early-stage small-cell lung cancerPharmacogenomics Journal
Theragen Etex/Genome Research Foundation2014Minke whale genome and aquatic adaptation in cetaceans (IF: 27.959)Nature Genetics
Theragen Etex/Genome Research Foundation2014Variation block-based genomics method for crop plants.BMC Genomics
Theragen Etex/Genome Research Foundation2013The tiger genome and comparative analysis with lion and snow leopard genomes. (IF: 12.353)Nature Communications
Theragen Etex/Genome Research Foundation2013Whole genome comparison of donor and cloned dogs.Scientific Reports
Theragen Etex2013GalaxyGemini: A web server for protein homo-oligomer structure prediction based on similarityBioinformatics
Theragen Etex2013IAnn: An event sharing platform for the life sciencesBioinformatics
Theragen Etex2013A genome-wide association study in koreans identifies susceptibility loci for allergic nickel dermatitisInternational Archives of Allergy and Immunology
Theragen Etex/Genome Research Foundation2013The tiger genome and comparative analysis with lion and snow leopard genomes (IF: 12.353)Nature Communications
Genome Research Foundation2013PPP1R1B-STARD3 chimeric fusion transcript in human gastric cancer promotes tumorigenesis through activation of PI3K/AKT signalingOncogene
Genome Research Foundation2013Genetic identification of a novel locus, ACCELERATED FLOWERING 1 that controls chromatin modification associated with histone H3 lysine 27 trimethylation in Arabidopsis thalianaPlant Science
Genome Research Foundation2013Comprehensive genome- and transcriptome-wide analyses of mutations associated with microsatellite instability in Korean gastric cancers (IF: 10.101)Genome Research
Genome Research Foundation2013The genetic basis of white tigersCurrent Biology
Genome Research Foundation2013Characterization of functional variants in 33 blood pressure loci using 1000 genomes project dataGenes and Genomics
Genome Research Foundation2013Peeling back the evolutionary layers of molecular mechanisms responsive to exercise-stress in the skeletal muscle of the racing horseDNA Research
Theragen Etex/Genome Research Foundation2012MetaBase - The wiki-database of biological databases (IF: 11.561)Nucleic Acids Research
Theragen Etex2012Korea Barcode of Life Database System (KBOL)Animal Cells and Systems
Theragen Etex2012De novo transcriptome sequencing of Momordica cochinchinensis to identify genes involved in the carotenoid biosynthesisPlant Molecular Biology
Theragen Etex/Genome Research Foundation2012A public resource facilitating clinical use of genomesPNAS
Theragen Etex/Genome Research Foundation2012Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-SeqBMC Genomics
Theragen Etex2012Low budget analysis of Direct-To-Consumer genomic testing familial dataF1000Research
Theragen Etex2011Molecular inflammation as an underlying mechanism of the aging process and age-related diseasesJournal of Dental Research
Theragen Etex2011Liverome: A curated database of liver cancer-related gene signatures with self-contained context informationBMC Genomics
Genome Research Foundation2011Comprehensive long-span paired-end-tag mapping reveals characteristic patterns of structural variations in epithelial cancer genomesGenome Research
Theragen Etex2011A proposal for the revision of molecular boundary typology.Journal of Biomolecular Structure and Dynamics
Theragen Etex2011Mutational hotspotsin the mitochondrial genome of lung cancer.Biochem Biophys Res Commun
Theragen Etex/Genome Research Foundation2011PanSNPdb:the Pan-Asian SNP genotyping database.PLoS One
Theragen Etex2011Gene expression pattern in transmitochondrial cytoplasmic hybrid cells harboringtype 2 diabetes-associated mitochondrial DNA haplogroups.PLoS One
Theragen Etex2011BetaDock:shape-priority docking method based on beta-complex.Journal of Biomolecular Structure and Dynamics
Theragen Etex2011How Many SNPs Should Be Used for the Human Phylogeny of Highly Related Ethnicities? A Case of Pan Asian 63 EthnicitiesGenomics & Informatics
Genome Research Foundation2010Whole-genome sequencing and intensive analysis of the undomesticated soybean (Glycine soja Sieb. and Zucc.) genomeProceedings of the National Academy of Sciences of the United States of America 107 (51), pp. 22032-22037
Theragen Etex2010Systematic cyanobacterial membrane proteome analysis by combining acid hydrolysis and digestive enzymes with nano-liquid chromatography-Fourier transform mass spectrometry.J Chromatogr A
Theragen Etex2010PDBWiki: added value through community annotation of the Protein Data Bank.Database (Oxford)